STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_02627Selenoprotein K. (92 aa)    
Predicted Functional Partners:
N307_08703
Retinoblastoma-binding protein 5.
    
 0.887
N307_07619
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.878
N307_02051
Lysine-specific demethylase 6A.
   
 0.790
N307_00990
5'-AMP-activated protein kinase subunit beta-1.
    
  0.785
N307_15491
5'-AMP-activated protein kinase subunit beta-2.
    
  0.785
N307_00315
Centromere protein N.
   
 0.781
N307_12603
Selenoprotein S.
   
 
 0.710
N307_15131
PR domain zinc finger protein 5.
   
 0.692
N307_13946
PR domain zinc finger protein 4.
   
 0.692
N307_10175
Histone H2B; Belongs to the histone H2B family.
    
  0.688
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.