STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_11835T-cell surface glycoprotein CD8 beta chain. (199 aa)    
Predicted Functional Partners:
N307_11836
T-cell surface glycoprotein CD8 alpha chain.
 
 
0.997
N307_10674
T-cell surface glycoprotein CD4.
   
 
 0.909
N307_10505
Tyrosine-protein kinase.
   
 
 0.856
N307_03096
T-cell surface glycoprotein CD3 delta chain.
   
 
 0.851
N307_03095
T-cell surface glycoprotein CD3 epsilon chain.
   
 
 0.831
N307_02860
Tyrosine-protein kinase.
   
 
 0.791
N307_14649
Tyrosine-protein kinase.
   
 
 0.791
N307_07123
Replication protein A 32 kDa subunit.
    
 0.749
N307_00257
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
    
 0.749
N307_02177
T-cell surface glycoprotein CD3 zeta chain.
   
 
 0.682
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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