STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_11730Mitochondrial intermembrane space import and assembly protein 40. (138 aa)    
Predicted Functional Partners:
N307_07643
Sulfhydryl oxidase.
    
 0.984
N307_08483
Mitochondrial import inner membrane translocase subunit Tim9.
   
 0.917
N307_14995
Mitochondrial import inner membrane translocase subunit Tim10.
   
 0.886
N307_12503
Mitochondrial import inner membrane translocase subunit Tim8 A; Belongs to the small Tim family.
   
 0.824
N307_07349
CHCH domain-containing protein.
    
 0.715
N307_14299
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
    
 
 0.706
N307_04615
Cytochrome c oxidase assembly factor 6.
   
 0.684
N307_11844
MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
   
 
 0.647
N307_12101
Ribonuclease P/MRP protein subunit POP5.
   
 
  0.644
N307_13954
Mitochondrial import inner membrane translocase subunit Tim21.
    
 
 0.638
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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