STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_03522Uncharacterized protein. (373 aa)    
Predicted Functional Partners:
N307_15243
WD repeat-containing protein 90.
    
 0.672
N307_04801
ACB domain-containing protein.
    
  0.603
N307_05702
UBX domain-containing protein 7.
    
 0.543
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.538
N307_00888
Intraflagellar transport protein 81.
    
 0.534
N307_06856
Rab-like 5.
    
  0.531
N307_07997
E3 ubiquitin-protein ligase RNF146.
    
  0.531
N307_02913
Intraflagellar transport protein 52.
    
 0.531
N307_09310
Leucine-rich repeat and guanylate kinase domain-containing protein.
   
  0.529
N307_11250
Tetratricopeptide repeat protein 30A.
    
  0.529
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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