STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_00425Uncharacterized protein. (137 aa)    
Predicted Functional Partners:
N307_04120
Fanconi anemia group M protein.
   
 0.999
N307_08136
DNA repair endonuclease XPF.
   
 0.979
N307_14486
DNA repair protein complementing XP-A cells.
    
 0.963
N307_04648
E3 ubiquitin-protein ligase FANCL.
    
 0.909
N307_11996
Fanconi anemia group B protein.
    
 0.908
N307_05840
Fanconi anemia group G protein.
    
 0.906
N307_13281
Structure-specific endonuclease subunit SLX4.
   
 0.869
N307_13280
Structure-specific endonuclease subunit SLX4.
   
 0.869
N307_04250
DNA repair protein complementing XP-G cells.
    
 0.851
N307_03630
Fanconi anemia group A protein.
   
 0.813
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.