STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_15144Bardet-Biedl syndrome 12 protein. (689 aa)    
Predicted Functional Partners:
N307_05875
McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin.
    
 0.875
N307_04223
Bardet-Biedl syndrome 10 protein.
    
 0.868
N307_15138
Bardet-Biedl syndrome 7 protein.
   
 0.746
N307_15257
Protein PTHB1.
    
 0.662
N307_14330
T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.
    
 0.655
N307_10380
T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.
    
 0.655
N307_04276
DUF4209 domain-containing protein.
    
 0.655
N307_05860
T-complex protein 1 subunit delta; Belongs to the TCP-1 chaperonin family.
    
 0.655
N307_10532
T-complex protein 1 subunit theta.
    
 0.651
N307_05859
Protein FAM161A.
    
 0.633
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.