STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_05402Microtubule-associated protein. (668 aa)    
Predicted Functional Partners:
N307_09073
Cyclin-dependent kinase 5.
    
 0.985
N307_11393
Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.
    
 0.985
N307_10301
14-3-3 protein zeta; Belongs to the 14-3-3 family.
    
 
 0.924
N307_12071
Ig lambda chain V-1 region.
    
   0.922
N307_10126
Calcium/calmodulin-dependent protein kinase type II subunit alpha.
   
 0.893
N307_01608
STIP1 homology and U box-containing protein 1.
    
 
 0.885
N307_14107
Mitogen-activated protein kinase.
   
 0.884
N307_14752
Epimerase domain-containing protein.
    
  0.862
N307_11963
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7.
    
  0.859
N307_09225
NADH_4Fe-4S domain-containing protein.
    
  0.859
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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