STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_14109Peptidyl-prolyl cis-trans isomerase-like 2. (440 aa)    
Predicted Functional Partners:
N307_04198
Pre-mRNA-splicing factor CWC22.
   
 0.978
N307_14709
Pre-mRNA-splicing factor SYF2.
 
  
 0.958
N307_08283
Superkiller viralicidic activity 2-like 2.
   
 0.952
N307_01088
Pre-mRNA-processing factor 17.
   
 0.951
N307_01122
Peptidylprolyl isomerase domain and WD repeat-containing protein 1.
  
0.950
N307_08860
Coiled-coil domain-containing protein 12.
   
 0.948
N307_14705
Serine/arginine repetitive matrix protein 1.
    
 0.944
N307_07771
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
  
 
0.936
N307_07706
Protein BUD31.
    
 0.933
N307_11536
SNW domain-containing protein 1.
    
 0.921
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.