STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_04923Signal-regulatory protein beta-1 isoform 3. (218 aa)    
Predicted Functional Partners:
N307_06246
Ig heavy chain V-III region VH26.
   
 0.984
N307_01680
Leukocyte surface antigen CD47.
   
 0.983
N307_00937
Tyrosine-protein phosphatase non-receptor type 11.
    
 0.908
N307_09715
Triggering receptor expressed on myeloid cells 2.
    
 0.874
N307_10505
Tyrosine-protein kinase.
   
 0.864
N307_10685
Tyrosine-protein phosphatase non-receptor type 6.
    
 0.854
N307_06006
Serine protease HTRA1.
    
   0.849
N307_01551
Complement C1q subcomponent subunit C.
   
  0.816
N307_00936
Tyrosine-protein phosphatase non-receptor type 11.
    
 0.815
N307_05402
Microtubule-associated protein.
    
   0.798
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.