STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_09165High affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (578 aa)    
Predicted Functional Partners:
N307_10745
Choline transporter-like 1; Belongs to the CTL (choline transporter-like) family.
     
 0.786
N307_10885
Choline transporter-like 5; Belongs to the CTL (choline transporter-like) family.
     
 0.784
N307_05805
Choline transporter-like 3; Belongs to the CTL (choline transporter-like) family.
     
 0.774
N307_12083
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
  
 0.699
N307_06024
Delta-1-pyrroline-5-carboxylate synthase.
     
 0.618
N307_02792
Solute carrier family 22 member 5.
   
 0.600
N307_02791
Solute carrier family 22 member 4.
   
 0.600
N307_03732
Solute carrier family 22 member 2.
    
 0.539
N307_03730
Solute carrier family 22 member 3.
    
 0.539
N307_03731
Solute carrier family 22 member 2.
    
 0.539
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.