STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_07640Na(+)/H(+) exchange regulatory cofactor NHE-RF2. (346 aa)    
Predicted Functional Partners:
N307_13448
Ezrin.
    
 0.944
N307_04068
Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer.
   
 0.943
N307_06478
Radixin.
    
 0.943
N307_12522
Moesin.
    
 0.943
N307_13249
Protein kinase C beta type.
    
 0.810
N307_08608
cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.
   
 0.778
N307_12053
Merlin.
    
 0.775
N307_07342
Merlin.
    
 0.775
N307_02043
Peripheral plasma membrane protein CASK.
    
 0.725
N307_02111
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.
    
0.704
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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