STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_07643Sulfhydryl oxidase. (64 aa)    
Predicted Functional Partners:
N307_11730
Mitochondrial intermembrane space import and assembly protein 40.
    
 0.984
N307_14995
Mitochondrial import inner membrane translocase subunit Tim10.
   
 0.751
N307_12503
Mitochondrial import inner membrane translocase subunit Tim8 A; Belongs to the small Tim family.
   
 0.718
N307_09441
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 
 0.682
N307_08483
Mitochondrial import inner membrane translocase subunit Tim9.
   
 0.670
N307_14797
Cytochrome c oxidase assembly factor 5.
   
  
 0.634
N307_07349
CHCH domain-containing protein.
   
 
 0.581
N307_10913
Protein salvador 1.
      
 0.573
N307_09443
Gonadotropin inhibitory hormone peptides.
    
 
 0.531
N307_14299
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.529
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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