STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_11053Matrix metalloproteinase-16. (500 aa)    
Predicted Functional Partners:
N307_13051
Metalloproteinase inhibitor 2.
    
 0.877
N307_04452
Metalloproteinase inhibitor 3.
    
 0.833
N307_02070
Proheparin-binding EGF-like growth factor.
    
 0.772
N307_03475
Matrix metalloproteinase-24.
  
  
 
0.742
N307_04653
Collagenase 3.
  
0.665
N307_08334
Metalloproteinase inhibitor 4.
    
 0.581
N307_02806
Neuroendocrine convertase 1.
    
 0.573
N307_12601
Proprotein convertase subtilisin/kexin type 6; Belongs to the peptidase S8 family.
    
 0.573
N307_05311
Proprotein convertase subtilisin/kexin type 5; Belongs to the peptidase S8 family.
    
 0.573
N307_03579
Proprotein convertase subtilisin/kexin type 7.
    
 0.573
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.