STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12185Desmoplakin. (2702 aa)    
Predicted Functional Partners:
N307_13149
Integrin beta.
   
 0.846
N307_09982
Desmocollin-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
  
 0.804
N307_05517
Junction plakoglobin.
   
 0.803
N307_03323
Transcription and mRNA export factor ENY2.
    
 0.709
N307_10722
Plakophilin-2.
   
 0.701
N307_02961
Transcription initiation protein SPT3.
    
 0.698
N307_09984
Desmoglein-2.
   
 0.684
N307_01802
Catenin beta-1.
    
 0.682
N307_02869
Microtubule-associated protein RP/EB family member 1.
    
 
 0.672
N307_07335
Nuclear receptor corepressor 1.
   
 0.671
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.