STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_03814Putative RNA-binding protein 46. (467 aa)    
Predicted Functional Partners:
N307_13398
TATA-binding protein-associated factor 2N.
   
  0.669
N307_05325
40S ribosomal protein S6.
   
   0.661
N307_02320
Heterogeneous nuclear ribonucleoprotein K.
   
 0.652
N307_02835
Heterogeneous nuclear ribonucleoprotein K.
   
 0.652
N307_09445
Heterogeneous nuclear ribonucleoproteins A2/B1.
   
 0.648
N307_07460
Heterogeneous nuclear ribonucleoprotein U.
   
 0.645
N307_11870
Deleted in azoospermia-like.
   
 0.626
N307_09416
Serine/arginine-rich splicing factor 3.
   
 0.605
N307_05688
Transformer-2 protein beta.
   
 0.602
N307_09433
Transformer-2 protein alpha.
   
 0.602
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.