Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
N307_00575 | N307_02268 | A0A093GCW4 | A0A093GTA9 | Neuropilin; Belongs to the neuropilin family. | Plexin-D1. | 0.875 |
N307_00575 | N307_03408 | A0A093GCW4 | A0A093IDR1 | Neuropilin; Belongs to the neuropilin family. | Plexin-A2. | 0.830 |
N307_00575 | N307_03409 | A0A093GCW4 | A0A093GD98 | Neuropilin; Belongs to the neuropilin family. | Plexin-A2. | 0.823 |
N307_00575 | N307_03973 | A0A093GCW4 | A0A093GMH4 | Neuropilin; Belongs to the neuropilin family. | Plexin-C1. | 0.784 |
N307_00575 | N307_04073 | A0A093GCW4 | A0A093G803 | Neuropilin; Belongs to the neuropilin family. | Hepatocyte growth factor receptor. | 0.737 |
N307_00575 | N307_09316 | A0A093GCW4 | A0A093GK95 | Neuropilin; Belongs to the neuropilin family. | Plexin-A4. | 0.898 |
N307_00575 | N307_09552 | A0A093GCW4 | A0A093G3Z5 | Neuropilin; Belongs to the neuropilin family. | Semaphorin-6D; Belongs to the semaphorin family. | 0.722 |
N307_00575 | N307_11311 | A0A093GCW4 | A0A093G1X2 | Neuropilin; Belongs to the neuropilin family. | Plexin-A1. | 0.830 |
N307_00575 | N307_11312 | A0A093GCW4 | A0A093IBQ6 | Neuropilin; Belongs to the neuropilin family. | Plexin-A1. | 0.830 |
N307_00575 | N307_12258 | A0A093GCW4 | A0A093GP67 | Neuropilin; Belongs to the neuropilin family. | Semaphorin-6A; Belongs to the semaphorin family. | 0.764 |
N307_02268 | N307_00575 | A0A093GTA9 | A0A093GCW4 | Plexin-D1. | Neuropilin; Belongs to the neuropilin family. | 0.875 |
N307_02268 | N307_04073 | A0A093GTA9 | A0A093G803 | Plexin-D1. | Hepatocyte growth factor receptor. | 0.590 |
N307_02268 | N307_09552 | A0A093GTA9 | A0A093G3Z5 | Plexin-D1. | Semaphorin-6D; Belongs to the semaphorin family. | 0.685 |
N307_02268 | N307_12258 | A0A093GTA9 | A0A093GP67 | Plexin-D1. | Semaphorin-6A; Belongs to the semaphorin family. | 0.649 |
N307_03408 | N307_00575 | A0A093IDR1 | A0A093GCW4 | Plexin-A2. | Neuropilin; Belongs to the neuropilin family. | 0.830 |
N307_03408 | N307_03409 | A0A093IDR1 | A0A093GD98 | Plexin-A2. | Plexin-A2. | 0.916 |
N307_03408 | N307_04073 | A0A093IDR1 | A0A093G803 | Plexin-A2. | Hepatocyte growth factor receptor. | 0.590 |
N307_03408 | N307_09552 | A0A093IDR1 | A0A093G3Z5 | Plexin-A2. | Semaphorin-6D; Belongs to the semaphorin family. | 0.620 |
N307_03408 | N307_11312 | A0A093IDR1 | A0A093IBQ6 | Plexin-A2. | Plexin-A1. | 0.899 |
N307_03408 | N307_12258 | A0A093IDR1 | A0A093GP67 | Plexin-A2. | Semaphorin-6A; Belongs to the semaphorin family. | 0.610 |
page 1 of 5