STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_00154Cysteine-rich motor neuron 1 protein. (1025 aa)    
Predicted Functional Partners:
N307_11830
FRAS1-related extracellular matrix protein 1.
    
 0.834
N307_15097
Extracellular matrix protein FRAS1.
    
0.831
N307_02444
Nucleoporin GLE1.
    
 0.724
N307_12811
Histone chaperone ASF1.
    
 0.655
N307_14525
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.648
N307_10132
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.644
N307_06046
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.633
N307_08045
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
   0.632
N307_07646
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
   0.631
N307_11138
40S ribosomal protein S27.
   
   0.629
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.