STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_05954Putative short-chain dehydrogenase/reductase family 42E member 2; Belongs to the 3-beta-HSD family. (335 aa)    
Predicted Functional Partners:
N307_10582
Taperin.
    
 0.626
N307_01263
Apoptosis-inducing factor 2.
     
 0.540
N307_15098
Uncharacterized protein.
     
 0.538
N307_08817
Glutathione S-transferase omega-1; Belongs to the GST superfamily.
     
 0.505
N307_15496
Peroxiredoxin-6.
    
 0.469
N307_02570
Glutathione synthetase.
     
 0.464
N307_00728
Glutaredoxin domain-containing cysteine-rich protein 2.
     
 0.453
N307_02203
Myosin-IIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.438
N307_14025
Glutaredoxin domain-containing cysteine-rich protein 1.
     
 0.435
N307_07899
Phospholipase A2.
   
 
  0.420
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.