STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_15011Rhombotin-2. (144 aa)    
Predicted Functional Partners:
N307_10867
T-cell acute lymphocytic leukemia protein 1.
   
 0.988
N307_08762
LIM domain-binding protein 1.
    
 0.943
N307_08054
LIM domain-binding protein 2.
    
 0.920
N307_11939
Transcription factor E2-alpha.
    
 0.909
N307_13668
Uncharacterized protein.
    
 0.865
N307_07583
Transcription factor GATA-6.
    
 0.865
N307_01165
GATA-binding factor 2.
    
 0.847
N307_09331
GATA-binding factor 3.
    
 0.765
N307_05673
Core-binding factor subunit beta.
    
 0.745
N307_14231
T-cell acute lymphocytic leukemia protein 2.
    
 0.693
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.