STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08380Transducin-like enhancer protein 2. (473 aa)    
Predicted Functional Partners:
N307_10067
Transcription factor 7.
    
 0.799
N307_06789
Lymphoid enhancer-binding factor 1.
    
 0.799
N307_08843
Transcription factor 7-like 2.
    
 0.799
N307_09124
Homeobox protein engrailed-like.
    
 
 0.684
N307_01104
Histone deacetylase 2.
    
 0.659
N307_15512
Histone deacetylase 3.
    
 0.659
N307_05381
Histone deacetylase 8.
    
 0.659
N307_14648
Histone deacetylase 1.
    
 0.659
N307_11789
Hepatocyte nuclear factor 3-alpha.
    
 0.657
N307_10348
T-box transcription factor TBX20.
    
 
 0.652
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.