STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_06407Putative tubulin polyglutamylase TTLL1. (425 aa)    
Predicted Functional Partners:
N307_15389
Enhancer of mRNA-decapping protein 3.
    
 
 0.906
N307_06528
Leucine-rich repeat-containing protein 49.
    
 0.863
N307_02067
Peroxisomal NADH pyrophosphatase NUDT12.
   
  0.848
N307_04303
Tubulin polyglutamylase complex subunit 2.
   
 0.848
N307_14830
Nicolin-1.
   
 0.846
N307_12300
TBC1 domain family member 19.
   
 
 0.704
N307_07792
mRNA-decapping enzyme 1A.
    
 
 0.702
N307_00266
M7GpppN-mRNA hydrolase.
    
 
 0.685
N307_05850
Uncharacterized protein KIAA1841.
    
   0.658
N307_13636
Stathmin; Belongs to the stathmin family.
    
 
 0.613
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.