STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_06152Poly [ADP-ribose] polymerase. (1126 aa)    
Predicted Functional Partners:
N307_06659
SH3 domain-binding protein 2.
    
 
 0.937
N307_07997
E3 ubiquitin-protein ligase RNF146.
    
 0.932
N307_06095
Hypoxia-inducible factor 1-alpha inhibitor.
    
 
 0.929
N307_01585
Axin-1.
    
 0.912
N307_01206
Induced myeloid leukemia cell differentiation protein Mcl-1.
    
 
 0.905
N307_12908
Axin-2.
    
 0.900
N307_11332
Uncharacterized protein.
   
 0.789
N307_02230
Spectrin beta chain; Belongs to the spectrin family.
   
 0.789
N307_04819
GDP-mannose 4,6 dehydratase.
    
 
 0.732
N307_12262
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 0.725
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.