STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12765Synaptotagmin-16. (396 aa)    
Predicted Functional Partners:
N307_02992
Intersectin-2.
     
 0.681
N307_11103
Stonin-2.
   
 0.592
N307_02043
Peripheral plasma membrane protein CASK.
     
 0.583
N307_10267
Stonin-1.
    
 0.579
N307_07249
E3 ubiquitin-protein ligase SH3RF1.
    
  0.560
N307_05874
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.539
N307_12706
Intersectin-1.
     
 0.531
N307_05769
Ras-related protein Rab-3A.
   
 0.526
N307_04063
Ras-related protein Rab-3C.
   
 0.526
N307_09046
Ras-related protein Rab-3B.
   
 0.523
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.