STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_04095Zinc finger protein 521. (1174 aa)    
Predicted Functional Partners:
N307_01084
Adenylate kinase 9; Belongs to the adenylate kinase family.
    
  0.839
N307_01083
Adenylate kinase 9.
    
  0.839
N307_12946
Zinc finger protein 536.
    
 
0.614
N307_15512
Histone deacetylase 3.
    
  0.592
N307_13516
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 0.574
N307_11942
Methyl-CpG-binding domain protein 3.
    
  0.558
N307_01541
Speckle-type POZ protein-like.
   
  0.552
N307_02051
Lysine-specific demethylase 6A.
    
 0.544
N307_00537
Ragulator complex protein LAMTOR2.
    
  0.531
N307_05488
BRCA1-associated RING domain protein 1.
    
 0.530
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.