STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13083Beta-1,3-N-acetylglucosaminyltransferase radical fringe. (268 aa)    
Predicted Functional Partners:
N307_05136
Beta-1,3-N-acetylglucosaminyltransferase.
  
  
 
0.835
N307_10591
Negative elongation factor B.
   
 0.835
N307_07733
Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe.
  
  
 
0.834
N307_04845
Neurogenic locus notch protein 1.
    
 0.824
N307_05270
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
    
  0.796
N307_04846
Neurogenic locus notch protein 1.
    
 0.786
N307_15483
Neurogenic locus notch protein 2.
    
 0.751
N307_15482
Neurogenic locus notch protein 2.
    
 0.751
N307_05120
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.744
N307_03770
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.736
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.