STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_03883Echinoderm microtubule-associated protein-like 1. (784 aa)    
Predicted Functional Partners:
N307_12819
Tyrosine-protein kinase receptor.
   
 0.841
N307_15130
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.831
N307_07742
Mitotic spindle assembly checkpoint protein MAD1.
    
 0.790
N307_05300
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
    
 0.777
N307_13364
Transcription initiation factor TFIID subunit 12.
   
 0.776
N307_06880
Transcription initiation factor TFIID subunit 9.
    
 0.776
N307_09641
Transcription initiation factor TFIID subunit 10.
    
 0.775
N307_02243
Mitotic checkpoint serine/threonine-protein kinase BUB1.
   
 0.773
N307_13531
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
   
 0.773
N307_09386
Tyrosine-protein kinase.
   
  0.770
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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