STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13155Unconventional myosin-XV; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1043 aa)    
Predicted Functional Partners:
N307_13153
Unconventional myosin-XV.
 
      0.888
N307_00630
Unconventional myosin-Vc.
 
  
 0.882
N307_12591
Whirlin.
    
 0.861
N307_13521
Harmonin.
   
 0.852
N307_05781
Usher syndrome type-1G protein.
   
 0.848
N307_05948
Ankyrin repeat and SAM domain-containing protein 4B.
   
 0.809
N307_13203
Myosin regulatory light chain 2, smooth muscle minor isoform.
    
 0.762
N307_14535
Calmodulin; Belongs to the calmodulin family.
    
 0.689
N307_08445
Calmodulin; Belongs to the calmodulin family.
    
 0.689
N307_03741
Fibronectin type III domain-containing protein 1.
    
  0.679
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.