STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08891BET1. (106 aa)    
Predicted Functional Partners:
N307_12233
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.999
N307_02306
Golgi SNAP receptor complex member 2.
   
 0.999
N307_07425
Golgi SNAP receptor complex member 1.
    
 0.999
N307_15481
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
   
 0.987
N307_04439
Vesicle-trafficking protein SEC22a; Belongs to the synaptobrevin family.
   
 0.965
N307_11057
Vesicle-trafficking protein SEC22c; Belongs to the synaptobrevin family.
   
 0.955
N307_02249
Beta-soluble NSF attachment protein.
    
 0.953
N307_15459
Syntaxin-17; Belongs to the syntaxin family.
   
 0.894
N307_07863
Ras-related protein Rab-1A.
    
 0.893
N307_07121
Syntaxin-12; Belongs to the syntaxin family.
   
 0.888
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.