STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_06897Ribosomal protein S6 kinase alpha-6. (699 aa)    
Predicted Functional Partners:
N307_14107
Mitogen-activated protein kinase.
   
0.944
N307_04294
Ribosomal protein S6 kinase alpha-2.
  
 
 
0.918
N307_08659
Syntaxin-18.
    
 0.853
N307_05189
TBC1 domain family member 7.
     
 0.844
N307_05092
Cyclic AMP-dependent transcription factor ATF-4.
     
 0.840
N307_04023
Neuroblastoma-amplified sequence.
    
 0.829
N307_14735
Ribosomal protein S6 kinase 2 alpha.
  
  
 
0.725
N307_13835
Cyclic AMP-dependent transcription factor ATF-1.
   
 0.721
N307_04439
Vesicle-trafficking protein SEC22a; Belongs to the synaptobrevin family.
   
 0.684
N307_11057
Vesicle-trafficking protein SEC22c; Belongs to the synaptobrevin family.
   
 0.684
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.