STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_14870mRNA cap guanine-N7 methyltransferase. (413 aa)    
Predicted Functional Partners:
N307_06300
Ribosome-binding protein 1.
    
 0.978
N307_06327
mRNA-capping enzyme.
   
 0.977
N307_09583
RNMT-activating mini protein.
   
 
 0.919
N307_00865
General transcription factor IIH subunit 3.
   
 
 0.878
N307_03770
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.861
N307_06177
RNA/RNP complex-1-interacting phosphatase.
   
 0.832
N307_05270
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
   
 
 0.811
N307_08353
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
   
 
  0.806
N307_11346
DNA-directed RNA polymerases I and III subunit RPAC1.
   
 0.800
N307_02632
Cyclin-dependent kinase 7.
   
 
 0.784
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.