STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08112Calcium-regulated heat stable protein 1. (152 aa)    
Predicted Functional Partners:
N307_13438
tRNA-specific adenosine deaminase 2.
    
 0.886
N307_09798
Small nuclear ribonucleoprotein F.
    
  0.651
N307_15292
Small nuclear ribonucleoprotein G.
    
  0.640
N307_14096
Small nuclear ribonucleoprotein Sm D3.
   
 0.640
N307_12566
Putative ATP-dependent RNA helicase DDX6.
  
 0.633
N307_08918
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.627
N307_09733
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.619
N307_07138
Uncharacterized protein.
  
 
 0.603
N307_00435
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.593
N307_07460
Heterogeneous nuclear ribonucleoprotein U.
    
 0.593
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.