STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_11198Protein patched 1. (1374 aa)    
Predicted Functional Partners:
N307_04372
Indian hedgehog protein.
   
 0.991
N307_09121
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
   
 0.991
N307_09279
G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.989
N307_06632
Brother of CDO.
    
 0.944
N307_12923
E3 ubiquitin-protein ligase SMURF2.
    
 0.918
N307_00793
Uncharacterized protein.
   
 0.837
N307_04424
Zinc finger protein GLI2.
   
 0.822
N307_13578
Zinc finger protein GLIS3.
   
 0.707
N307_08789
Suppressor of fused.
    
 
 0.707
N307_09024
Zinc finger protein GLIS1.
   
 0.707
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.