STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13338Transmembrane protein 106B. (275 aa)    
Predicted Functional Partners:
N307_04073
Hepatocyte growth factor receptor.
   
 
 0.773
N307_06858
KAT8 regulatory NSL complex subunit 2.
    
  0.546
N307_04247
Testis-expressed sequence 30 protein.
    
 0.540
N307_11992
Charged multivesicular body protein 2b.
    
 
 0.513
N307_06058
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.501
N307_08609
Sterile alpha motif domain-containing protein 13.
    
 0.501
N307_06439
Microtubule-associated protein 6.
    
 0.483
N307_06581
PHD finger protein 13.
    
  0.482
N307_11917
Histone-lysine N-methyltransferase 2E.
    
  0.482
N307_10733
PHD finger protein 20.
    
  0.482
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.