STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12100Calcium-binding protein 1. (167 aa)    
Predicted Functional Partners:
N307_02203
Myosin-IIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.903
N307_02043
Peripheral plasma membrane protein CASK.
    
 0.866
N307_08791
ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family.
   
 0.838
N307_15243
WD repeat-containing protein 90.
   
 0.755
N307_01779
Nephrocystin-3.
    
 0.741
N307_10126
Calcium/calmodulin-dependent protein kinase type II subunit alpha.
   
 0.735
N307_04957
Ras GTPase-activating-like IQGAP2.
    
 0.728
N307_13905
Troponin I, fast skeletal muscle.
   
 0.712
N307_01198
Troponin I, slow skeletal muscle.
   
 0.712
N307_03571
Unconventional myosin-IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.698
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.