STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_04163DBF4-type zinc finger-containing protein 2. (215 aa)    
Predicted Functional Partners:
N307_08600
Sentrin-specific protease 6.
    
   0.658
N307_13463
Leucine-rich repeat LGI family member 2.
     
 0.596
N307_04162
Disintegrin and metalloproteinase domain-containing protein 23.
 
    
 0.582
N307_02141
Disks large 3.
    
 0.549
N307_12118
Disks large 2.
    
 0.549
N307_00299
Disks large 1.
    
 0.549
N307_14569
Uncharacterized protein.
    
 0.549
N307_06158
Leucine-rich glioma-inactivated protein 1.
     
 0.518
N307_09310
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
  0.511
N307_12181
Ras GTPase-activating protein 1.
    
  0.455
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.