STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_06023Tectonic-3. (396 aa)    
Predicted Functional Partners:
N307_07668
B9 domain-containing protein 1.
    
 0.858
N307_00915
Tectonic-1.
  
 
0.843
N307_08046
Coiled-coil and C2 domain-containing protein 2A.
    
 0.835
N307_07429
Meckel syndrome type 1 protein.
    
 0.808
N307_01292
Elongation factor 2.
    
 0.797
N307_14429
Meckelin.
     
 0.780
N307_06024
Delta-1-pyrroline-5-carboxylate synthase.
 
 
    0.759
N307_09196
Transmembrane protein 216.
     
 0.747
N307_09328
DNA/RNA-binding protein KIN17.
    
 0.699
N307_04961
Tr-type G domain-containing protein.
    
 0.654
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.