STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_06143Interferon-induced protein with tetratricopeptide repeats 5. (473 aa)    
Predicted Functional Partners:
N307_09541
RNA polymerase-associated protein LEO1.
    
 0.931
N307_01084
Adenylate kinase 9; Belongs to the adenylate kinase family.
   
 0.853
N307_01083
Adenylate kinase 9.
   
 0.853
EIF3E
Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
 0.792
N307_04289
Kinesin-like KIF25; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.792
N307_15257
Protein PTHB1.
    
 0.776
N307_01082
Adenylate kinase 9; Belongs to the adenylate kinase family.
   
 0.774
N307_08451
Tetratricopeptide repeat protein 8.
    
 0.756
N307_05968
Eukaryotic translation initiation factor 2-alpha kinase 1.
    
 0.749
N307_10774
Parafibromin.
    
 0.747
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.