STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_0009240S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (152 aa)    
Predicted Functional Partners:
N307_07646
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.996
RPS3A
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 0.996
N307_10132
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
 0.996
N307_00435
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.996
N307_08918
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.996
N307_10897
40S ribosomal protein S29.
  
 0.996
N307_00255
40S ribosomal protein S17.
  
 0.996
N307_14525
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.996
N307_04749
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.996
N307_06046
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.996
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.