STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_00097Transcription factor E2F7. (850 aa)    
Predicted Functional Partners:
N307_12432
Transcription factor E2F1.
   
0.648
N307_15029
Transcription factor E2F8.
  
  
0.643
N307_14197
Neurofibromin.
   
  
 0.576
N307_09653
Cyclin-A1; Belongs to the cyclin family.
   
 
 0.542
N307_12475
Retinoblastoma-like 2.
   
 
 0.541
N307_11235
Retinoblastoma-associated protein.
    
 
 0.540
N307_07239
Transcription factor Dp-1.
    
 
 0.537
N307_08146
Transcription factor Dp-2.
    
 
 0.537
N307_02621
Transforming protein p68/c-ets-1.
      
 0.519
N307_14776
Serine/threonine-protein kinase Nek2.
   
  
 0.510
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.