STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_05679Metallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals. (53 aa)    
Predicted Functional Partners:
N307_01827
Zinc transporter 10.
      
 0.568
N307_12595
Putative low affinity copper uptake protein 2.
    
 
 0.548
N307_14531
Zinc transporter ZIP3.
      
 0.511
N307_13465
Extracellular superoxide dismutase [Cu-Zn].
    
 
 0.464
N307_12728
Superoxide dismutase [Cu-Zn].
    
 
 0.464
N307_10147
Copper transport protein ATOX1.
   
  
 0.428
N307_04390
Natural resistance-associated macrophage protein 1.
   
  
 0.414
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.