STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_10956SAM domain-containing protein SAMSN-1. (509 aa)    
Predicted Functional Partners:
N307_09513
SHC-transforming protein 1.
    
 0.615
N307_01871
SHC-transforming protein 3.
    
 0.615
N307_09560
SHC-transforming protein 4.
    
 0.615
N307_12588
Tumor necrosis factor ligand superfamily member 15.
      
 0.564
N307_07670
GRB2-related adapter protein.
   
  0.562
N307_13161
Growth factor receptor-bound protein 2.
   
  0.562
N307_08183
Sterile alpha motif domain-containing protein 5.
 
      0.545
N307_03738
Acetyl-CoA acetyltransferase, cytosolic; Belongs to the thiolase-like superfamily. Thiolase family.
      
 0.539
N307_05149
Cytokine receptor common subunit beta.
   
 
  0.526
N307_00300
Melanotransferrin.
      
 0.515
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.