STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13014BTB/POZ domain-containing protein 17. (484 aa)    
Predicted Functional Partners:
N307_15257
Protein PTHB1.
    
 0.614
N307_04289
Kinesin-like KIF25; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.607
N307_15138
Bardet-Biedl syndrome 7 protein.
    
 0.592
N307_08451
Tetratricopeptide repeat protein 8.
    
  0.584
N307_05702
UBX domain-containing protein 7.
    
  0.572
N307_02534
Cullin-3; Belongs to the cullin family.
    
 0.561
N307_13859
CDK2-associated and cullin domain-containing protein 1; Belongs to the cullin family.
    
 0.561
N307_14851
2'-5'-oligoadenylate synthase-like 2.
    
 0.553
N307_10947
Long-chain fatty acid transport protein 6.
    
 0.549
N307_02434
Long-chain fatty acid transport protein 4.
    
 0.549
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.