STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_10484EF-hand domain-containing family member B. (552 aa)    
Predicted Functional Partners:
N307_15243
WD repeat-containing protein 90.
    
   0.993
N307_13388
EF-hand domain-containing protein 1.
   
   0.924
N307_00547
Enkurin.
   
 
 0.922
N307_12349
Parkin coregulated gene protein.
   
   0.869
N307_08064
PACRG-like.
   
   0.869
N307_09973
Uncharacterized protein C3orf67.
    
   0.867
N307_02757
Tektin-3.
   
   0.816
N307_14173
Tektin-1.
   
   0.809
N307_13411
RIB43A-like with coiled-coils protein 2.
   
   0.807
N307_02750
WD repeat-containing protein 16.
   
   0.806
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.