STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12231Striatin-3. (711 aa)    
Predicted Functional Partners:
N307_09281
Striatin-interacting protein 2.
    
 
 0.930
N307_00106
CTTNBP2 N-terminal-like.
   
 
 0.849
N307_03957
FGFR1 oncogene partner 2.
    
 
 0.823
N307_08530
MOB-like phocein.
   
 
 0.818
N307_09819
Transcription factor AP-1; Belongs to the bZIP family.
    
 0.798
N307_03243
Programmed cell death protein 10.
    
 
 0.782
N307_02000
Serine/threonine-protein kinase MST4.
    
 
 0.761
N307_15099
Serine/threonine-protein phosphatase.
    
 
 0.755
N307_10069
Serine/threonine-protein phosphatase.
    
 
 0.755
N307_01148
Sarcolemmal membrane-associated protein.
    
 
 0.739
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.