STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_05706Inhibitor of growth protein. (230 aa)    
Predicted Functional Partners:
N307_14596
Chromatin modification-related protein MEAF6.
   
 0.945
N307_06058
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.871
N307_10071
Protein Jade-2.
    
 0.837
N307_15157
Protein Jade-1.
    
 0.834
N307_09937
Peregrin.
    
 0.832
N307_05983
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
   
 0.825
N307_08037
Bromodomain-containing protein 1.
    
 0.819
N307_09409
Bromodomain and PHD finger-containing protein 3.
    
 0.818
N307_08609
Sterile alpha motif domain-containing protein 13.
    
 0.807
N307_04610
AT-rich interactive domain-containing protein 4B.
   
 0.801
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.