STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_01798Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (299 aa)    
Predicted Functional Partners:
N307_04228
Protection of telomeres protein 1.
    
 0.654
N307_01059
Prolyl endopeptidase.
   
  
 0.640
N307_07606
Golgin subfamily A member 7.
    
 0.595
N307_08743
Golgin subfamily A member 7B.
    
 0.595
N307_12644
Potassium voltage-gated channel subfamily S member 1; Belongs to the potassium channel family.
      
 0.570
N307_12191
Coagulation factor XIII A chain.
      
 0.566
N307_02794
DNA repair protein RAD50.
    
 0.539
N307_11049
Nibrin.
    
  0.538
N307_08210
Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.
    
  0.522
N307_13692
Uncharacterized protein.
     
 0.503
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.