STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_00260Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (137 aa)    
Predicted Functional Partners:
N307_09170
E3 SUMO-protein ligase RanBP2.
 
 
 0.928
N307_09169
E3 SUMO-protein ligase RanBP2.
 
 
 0.925
N307_01728
Protein disulfide-isomerase.
  
 0.888
N307_00697
Uncharacterized protein.
   
 0.884
N307_00704
Cartilage-associated protein.
   
 0.876
N307_14126
Ran-specific GTPase-activating protein.
 
 
 0.875
N307_00768
Prolyl 3-hydroxylase 1.
   
 0.836
N307_13921
Endoplasmin.
  
 0.829
N307_13069
Protein disulfide-isomerase.
  
 0.828
N307_11536
SNW domain-containing protein 1.
    
 0.800
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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