STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_04372Indian hedgehog protein. (308 aa)    
Predicted Functional Partners:
N307_11198
Protein patched 1.
   
 0.991
N307_06632
Brother of CDO.
    
 0.987
N307_10416
Protein dispatched 1.
   
 0.966
N307_06960
Hedgehog-interacting protein.
    
 0.960
N307_15192
Protein dispatched 2.
    
 0.922
N307_01440
Patched domain-containing protein 2.
    
 0.862
N307_08553
Glypican-5; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.850
N307_09121
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
  
  
 
0.834
N307_05546
Proteasome activator complex subunit 3.
   
 
  0.831
N307_09279
G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.815
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.