STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_04418Ras-related protein M-Ras. (208 aa)    
Predicted Functional Partners:
N307_08833
Leucine-rich repeat protein SHOC-2.
    
 0.992
N307_05300
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
   
 0.991
N307_01462
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform; Belongs to the PI3/PI4-kinase family.
   
 0.944
N307_06237
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform; Belongs to the PI3/PI4-kinase family.
   
 0.944
N307_09906
Ral guanine nucleotide dissociation stimulator-like 1.
    
 0.942
N307_14197
Neurofibromin.
    
 0.941
N307_05496
RAF proto-oncogene serine/threonine-protein kinase.
  
 0.930
N307_12207
Serine/threonine-protein kinase B-raf.
  
 0.929
N307_12424
Rap guanine nucleotide exchange factor 2.
   
 0.918
N307_14897
RalA-binding protein 1.
    
 0.917
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.