STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08563Thioredoxin domain-containing protein 6. (68 aa)    
Predicted Functional Partners:
N307_14120
Uncharacterized protein.
  
 0.883
N307_13927
Thioredoxin reductase 1, cytoplasmic; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
 0.883
N307_13368
PMSR domain-containing protein.
  
 0.863
N307_13655
Mitochondrial peptide methionine sulfoxide reductase.
  
 0.863
N307_05986
Protein FAM45A.
  
 0.858
N307_05988
Thioredoxin domain-containing protein.
  
 0.858
N307_00656
Peroxiredoxin-4.
  
 0.858
N307_04768
Peroxiredoxin-1.
  
 0.858
N307_01084
Adenylate kinase 9; Belongs to the adenylate kinase family.
  
 0.850
N307_01083
Adenylate kinase 9.
  
 0.850
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.